Analysis and Visualization of Archaeological Count Data
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Documentation for package ‘tabula’ version 3.3.1
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A B C D E F G H I J L M O P R S T W
-- A --
| as.data.frame-method | Coerce to a Data Frame |
| aves | Birds Species and Abundances |
-- B --
| Bertin | Bertin Diagram |
| bootstrap | Bootstrap Estimation |
| bootstrap-method | Bootstrap Estimation |
-- C --
| cantabria | Early Magdalenian Engraved Bones |
| composition | Richness |
| composition-method | Richness |
-- D --
| data.frame | Coerce to a Data Frame |
| diversity | Alpha Diversity |
| diversity-method | Alpha Diversity |
| doubleton | Number of Observed Species |
| doubleton-method | Number of Observed Species |
-- E --
| eppm | Seriograph |
| eppm-method | Seriograph |
| evenness | Evenness |
| evenness-method | Evenness |
-- F --
| Ford | Ford Diagram |
-- G --
| get | Get or Set Parts of an Object |
| get_method | Get or Set Parts of an Object |
| get_method-method | Get or Set Parts of an Object |
-- H --
| heterogeneity | Heterogeneity |
| heterogeneity-method | Heterogeneity |
-- I --
| index_ace | Abundance-based Coverage Estimator |
| index_ace-method | Abundance-based Coverage Estimator |
| index_baxter | Baxter's Rarefaction |
| index_baxter-method | Baxter's Rarefaction |
| index_berger | Berger-Parker Dominance Index |
| index_berger-method | Berger-Parker Dominance Index |
| index_binomial | Binomial Co-Occurrence Assessment |
| index_binomial-method | Binomial Co-Occurrence Assessment |
| index_boone | Boone Heterogeneity Measure |
| index_boone-method | Boone Heterogeneity Measure |
| index_brainerd | Brainerd-Robinson Quantitative Index |
| index_brainerd-method | Brainerd-Robinson Quantitative Index |
| index_bray | Bray-Curtis Similarity |
| index_bray-method | Bray-Curtis Similarity |
| index_brillouin | Brillouin Diversity Index. |
| index_brillouin-method | Brillouin Diversity Index. |
| index_chao1 | Chao1 Estimator |
| index_chao1-method | Chao1 Estimator |
| index_chao2 | Chao2 Estimator |
| index_chao2-method | Chao2 Estimator |
| index_cody | Cody Measure |
| index_cody-method | Cody Measure |
| index_hurlbert | Hurlbert's Rarefaction |
| index_hurlbert-method | Hurlbert's Rarefaction |
| index_ice | Incidence-based Coverage Estimator |
| index_ice-method | Incidence-based Coverage Estimator |
| index_jaccard | Jaccard Index |
| index_jaccard-method | Jaccard Index |
| index_margalef | Margalef Richness Index |
| index_margalef-method | Margalef Richness Index |
| index_mcintosh | McIntosh Dominance Index. |
| index_mcintosh-method | McIntosh Dominance Index. |
| index_menhinick | Menhinick Richness Index |
| index_menhinick-method | Menhinick Richness Index |
| index_morisita | Morisita-Horn Quantitative Index |
| index_morisita-method | Morisita-Horn Quantitative Index |
| index_routledge | Routledge Measures |
| index_routledge1 | Routledge Measures |
| index_routledge1-method | Routledge Measures |
| index_routledge2 | Routledge Measures |
| index_routledge2-method | Routledge Measures |
| index_routledge3 | Routledge Measures |
| index_routledge3-method | Routledge Measures |
| index_shannon | Shannon-Wiener Diversity Index |
| index_shannon-method | Shannon-Wiener Diversity Index |
| index_simpson | Simpson Dominance Index |
| index_simpson-method | Simpson Dominance Index |
| index_sorensen | Dice-Sorensen Qualitative Index |
| index_sorensen-method | Dice-Sorensen Qualitative Index |
| index_squares | Squares Estimator |
| index_squares-method | Squares Estimator |
| index_whittaker | Whittaker Measure |
| index_whittaker-method | Whittaker Measure |
| index_wilson | Wilson Measure |
| index_wilson-method | Wilson Measure |
-- J --
| jackknife | Jackknife Estimation |
| jackknife-method | Jackknife Estimation |
-- L --
| labels-method | Get or Set Parts of an Object |
-- M --
| matrigraph | Matrigraph |
| matrigraph-method | Matrigraph |
| mutators | Get or Set Parts of an Object |
-- O --
| observed | Number of Observed Species |
| observed-method | Number of Observed Species |
| occurrence | Co-Occurrence |
| occurrence-method | Co-Occurrence |
-- P --
| plot-method | Diversity Plot |
| plot-method | Rarefaction Plot |
| plot.DiversityIndex | Diversity Plot |
| plot.RarefactionIndex | Rarefaction Plot |
| plot_bertin | Bertin Diagram |
| plot_bertin-method | Bertin Diagram |
| plot_diceleraas | Dice-Leraas Diagram |
| plot_diceleraas-method | Dice-Leraas Diagram |
| plot_ford | Ford Diagram |
| plot_ford-method | Ford Diagram |
| plot_heatmap | Heatmap |
| plot_heatmap-method | Heatmap |
| plot_rank | Rank Plot |
| plot_rank-method | Rank Plot |
| plot_spot | Spot Plot |
| plot_spot-method | Spot Plot |
| profiles | Diversity Profiles |
| profiles-method | Diversity Profiles |
| pueblo | Pueblo IV Period Ceramics |
| pvi | Matrigraph |
| pvi-method | Matrigraph |
-- R --
| rarefaction | Rarefaction |
| rarefaction-method | Rarefaction |
| richness | Richness |
| richness-method | Richness |
-- S --
| seriograph | Seriograph |
| seriograph-method | Seriograph |
| set | Get or Set Parts of an Object |
| she | SHE Analysis |
| she-method | SHE Analysis |
| similarity | Similarity |
| similarity-method | Similarity |
| simulate | Measure Diversity by Comparing to Simulated Assemblages |
| simulate-method | Measure Diversity by Comparing to Simulated Assemblages |
| singleton | Number of Observed Species |
| singleton-method | Number of Observed Species |
-- T --
| test | Diversity Test |
| test_shannon | Diversity Test |
| test_shannon-method | Diversity Test |
| test_simpson | Diversity Test |
| test_simpson-method | Diversity Test |
| turnover | Turnover |
| turnover-method | Turnover |
-- W --
| woodland | Trees Incidences |