ba7d334c02a482f0a654775b5294588f *DESCRIPTION
486d34c793f206501a8b4fa0de535ad9 *NAMESPACE
481e04b786c878af97c39ca6aa3cbfdc *NEWS.md
ee936ec29a77c8e82a719ff18ac0fa59 *R/RcppExports.R
07fbeba985030b17abe187ee785fe182 *R/calc_commonness_error.R
82dadbbc34ed304079224115b188e405 *R/catch-routine-registration.R
b769b470d9b710c414e1f07ba625e5e6 *R/data.R
9659d57e4298c48c420acfd89831deb7 *R/generate_commonness_matrix_from_gdm.R
8a86e218e75b6ce473c9c0f395746987 *R/onUnload.R
e549882fe5994f61406700f97e0505fc *R/plot_commonness.R
5a7051a0856a0282c89b8fbfbdb0538d *R/plot_error.R
df5db9cc4a0685cc733f7ff96fecac2b *R/print.optim_sol.R
1c860d92da4d6b33ab1c42f81a112f8d *R/run_optimization_min_conf.R
c26de9abd02c82c116e6d7058bf29c00 *R/spectre-package.R
7ef23cb6ee68936559e5ecb51739141f *README.md
6d4108850b8dee62106c527138c545bd *build/vignette.rds
9a50df56352f447424f03e66addcef7a *data/alpha_list.rda
a5cda9267a2ea78bebe5336fa51ead1d *data/estimated_gamma.rda
d7844c214cb5db313a198748d18256ff *data/minimal_example_data.rda
b8d3b85a944ebf51356daeee6a958ba0 *data/target_matrix.rda
b3eb84ed033a0623a3dc2879bb8ad421 *inst/CITATION
271109298e60373fad68354913fe5c18 *inst/doc/getting_started_with_spectre.R
080917878296fc2e5f385f53a32c5103 *inst/doc/getting_started_with_spectre.Rmd
2d3f51bdfa55ed752247bd7446b165c7 *inst/doc/getting_started_with_spectre.html
ab269285022e946770cc4f7d6626a428 *inst/doc/minimal_example.R
e1bde2f190f46b9f49244f47d11aa245 *inst/doc/minimal_example.Rmd
7b71fd44359a80f4e4cadc9e9a287be5 *inst/doc/minimal_example.html
e332eab509b97d9577db3f8246118a96 *man/alpha_list.Rd
7c81c9e5acf82d78a055e501533734bf *man/calc_commonness_error.Rd
845dc46fe0844070912a9542a92cd79e *man/estimated_gamma.Rd
144b4adc73610d7faa2011b5925cb267 *man/figures/spectre.png
01501dff74e0eb3027a0486772d81c30 *man/generate_commonness_matrix_from_gdm.Rd
40d818df5f4d6571761998858a794480 *man/minimal_example_data.Rd
dae6d3fa41f4c9f458246355f3b2546d *man/plot_commonness.Rd
2ee6d8a210b84bfd95f23549b45a7345 *man/plot_error.Rd
2e325fcdef5104cf653412a193fe7551 *man/print.optim_sol.Rd
ebe6dc1b14e9f9401ae89ec0d264f78e *man/run_optimization_min_conf.Rd
8c20ba5e2b825d6c150068a7c591c4bd *man/spectre.Rd
f5c6d751d2392b95ebc3e654aa882ab5 *man/target_matrix.Rd
9c784ba96dae2078f74beeefffb0cf93 *src/RcppExports.cpp
3c6a0c94bf900ff10c8b68ebc8864ff6 *src/minconf.cpp
5218ceec7b49b4f45926a8c189ed05c0 *src/minconf.h
117008d9d425b09c7e17fef683b560da *src/optimizer.cpp
d06318b1b1216a59f81b2ccfe1e58042 *src/optimizer.h
d26a545311ccc4e79dab3bbe7467cd10 *src/test-minconf.cpp
c425d99ccae0e9f3bc68e97c19385107 *src/test-minconf.h
c2cb0c30e10da611f9fbe56aea52f7a9 *src/test-runner.cpp
d369203dcb5c00858863664393856d64 *tests/benchmark/benchmark-minconf.cpp
b948e0fcf27ca7df80840d3c2b8fbbcb *tests/benchmark/catch.hpp
910eaa15d7d96bf5b9a64d83521fbc01 *tests/testthat.R
59099728f05504a4a6d6fa9b5e0168f1 *tests/testthat/test-calc_commonness_error.R
7efab916634482ca3a69d873b8898f4f *tests/testthat/test-cpp.R
f0bf975fbb8b25f58376270af0941952 *tests/testthat/test-fixed_species.R
712db3042d5a97a43f78500c6145f4eb *tests/testthat/test-generate_commonness_matrix_from_gdm.R
5f3d23ce849d52981bbc26deea3fe1b6 *tests/testthat/test-min_conf_errors.R
75d3e718a01f67ab664d77298bd8c2a2 *tests/testthat/test-plot_commonness.R
23acc3215870ec0451a742dfecdedf51 *tests/testthat/test-plot_error.R
8b85f0bf2434636203a28a7493bfb6f0 *tests/testthat/test-run_optimization_min_conf.R
080917878296fc2e5f385f53a32c5103 *vignettes/getting_started_with_spectre.Rmd
e1bde2f190f46b9f49244f47d11aa245 *vignettes/minimal_example.Rmd
