Last updated on 2025-12-04 03:50:09 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.87 | 219.52 | 229.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 155.00 | 165.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 178.00 | 190.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 239.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [75s/76s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.311, system: 0.030, elapsed: 1.343 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.359, system: 0.027, elapsed: 8.393 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.175, system: 0.011, elapsed: 0.186 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.360, system: 0.158, elapsed: 3.524 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.006, elapsed: 0.167 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 13.866, system: 0.258, elapsed: 14.144 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.311, system: 0.025, elapsed: 1.627 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.447, system: 0.027, elapsed: 8.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.574, system: 0.146, elapsed: 3.724 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.165 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.180, system: 0.247, elapsed: 14.765 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.391, system: 0.022, elapsed: 1.413 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.395, system: 0.033, elapsed: 8.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.009, elapsed: 0.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.430, system: 0.149, elapsed: 3.581 seconds]
Computing values for grid cells...
... done. [user: 0.151, system: 0.002, elapsed: 0.154 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.099, system: 0.194, elapsed: 0.809 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.253, system: 0.451, elapsed: 15.240 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.393, system: 0.034, elapsed: 1.427 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.073, system: 0.039, elapsed: 9.171 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.010, elapsed: 0.201 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.162, elapsed: 3.944 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.555, system: 0.429, elapsed: 11.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.754, system: 0.700, elapsed: 26.927 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/93s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.446, system: 0.048, elapsed: 1.509 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.878, system: 0.033, elapsed: 8.941 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.189 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.401, system: 0.164, elapsed: 3.584 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.577, system: 0.279, elapsed: 14.922 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.027, elapsed: 1.723 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.549, system: 0.082, elapsed: 10.944 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.010, elapsed: 0.210 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.682, system: 0.165, elapsed: 3.896 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.707, system: 0.314, elapsed: 17.536 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.467, system: 0.028, elapsed: 1.499 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.803, system: 0.237, elapsed: 12.159 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.158, elapsed: 4.984 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.214 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.106, system: 0.216, elapsed: 0.886 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.046, system: 0.693, elapsed: 20.823 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.029, elapsed: 2.015 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.523, system: 0.059, elapsed: 12.193 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.211 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.179, elapsed: 4.718 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.221 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.691, system: 0.445, elapsed: 13.792 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.525, system: 0.752, elapsed: 34.001 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64