| Type: | Package |
| Title: | Gene Annotation of Rice (Oryza Sativa L.spp.japonica) |
| Version: | 1.0.2 |
| Author: | Xiang LI, Linna MA |
| Maintainer: | Xiang LI <ynaulx@gmail.com> |
| Description: | Gene annotation of rice (Oryza Sativa L.spp.japonica). The package is based on the annotation file from the website http://plants.ensembl.org/Oryza_sativa/Info/Index. Input gene's name then return some information, including the from position, the end position, the position type and the chromosome number. |
| Depends: | R (≥ 3.5.0) |
| Imports: | riceidconverter |
| License: | Artistic-2.0 |
| Encoding: | UTF-8 |
| LazyData: | true |
| RoxygenNote: | 7.0.2 |
| NeedsCompilation: | no |
| Packaged: | 2020-02-18 01:14:33 UTC; xiang |
| Repository: | CRAN |
| Date/Publication: | 2020-02-25 16:10:03 UTC |
Annotation of genes of rice (Oryza Sativa)
Description
ricegeneann Annotate the gene of rice (Oryza Sativa)
Usage
ricegeneannotation(myID, type)
Arguments
myID |
A vector of entrez id |
type |
Keytype of input id |
Value
Return a vector or a datafram
Author(s)
Xiang LI <ynaulx@gmail.com> Linna MA <973649882@qq.com>
Examples
convert_id <- ricegeneannotation('Os01g0100500','RAP')
convert_id <- ricegeneannotation(myID = 'Os01g0100500',
type = 'RAP')
Annotation of genes of rice (Oryza Sativa)
Description
ricegeneann Annotation of genes of rice (Oryza Sativa).
Input a or some gene name then return a or some information,
including the from position, end position, position type and
the chromosome number.
Author(s)
Xiang LI <ynaulx@gmail.com> Linna MA <973649882@qq.com>