[BioC] Missing file in rhdf5

A.J. Rossini rossini@u.washington.edu
08 Jul 2002 07:47:07 -0700


>>>>> "isaac" == Isaac Neuhaus <isaac.neuhaus@bms.com> writes:

    isaac> I got the following error while insdtalling the current bundle version
    isaac> of Bioconductor.



    isaac> [neuhausi@aurora Bioconductor]$ sudo R CMD INSTALL rhdf5
    isaac> * Installing *source* package 'rhdf5' ...
    isaac> ** libs
    isaac> gcc -I/usr/local/lib/R/include  -I/usr/local/include
    isaac> -D__NO_MATH_INLINES -mieee-fp  -fPIC  -g -O2 -c hdf5.c -o hdf5.o

    isaac> In file included from hdf5.c:1:
    isaac> common.h:7:18: hdf5.h: No such file or directory
    isaac> make: *** [hdf5.o] Error 1
    isaac> ERROR: compilation failed for package 'rhdf5'

Do you have the hdf5 system/development libraries on your system?

best,
-tony

-- 
A.J. Rossini				Rsrch. Asst. Prof. of Biostatistics
U. of Washington Biostatistics		rossini@u.washington.edu	
FHCRC/SCHARP/HIV Vaccine Trials Net	rossini@scharp.org
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