[BioC] External expression data/ MAS5 Signal

Sek Won Kong, M.D. skong@caregroup.harvard.edu
Thu, 13 Jun 2002 10:51:46 -0400


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Dear all

two quick questions

#1. how can I import the external expression value table to affy? If
possible, in which format?
#2. I saw AvgDiff, AvgDiff2, rma, and li.wong in express. Is it possible to
calculate the Signal value which is implemented to Microarray Suite version
5 in affy?

Thank you very much for the helps in advance.

SW

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<DIV><FONT face=3DArial size=3D2>Dear all</FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2>two quick questions</FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2>#1. how can I import the external =
expression value=20
table to affy? If possible, in which format?</FONT></DIV>
<DIV><FONT face=3DArial size=3D2>#2. I saw AvgDiff, AvgDiff2, rma, and =
li.wong in=20
express. Is it possible to calculate the Signal value which is =
implemented to=20
Microarray Suite version 5 in affy?</FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2>Thank you very much for the helps in=20
advance.</FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2>SW</FONT></DIV></BODY></HTML>

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