[BioC] Affy. memory allocation trouble!

[Robert Gentleman]

On Thu, Nov 21, 2002 at 10:10:23AM +0100, Jens Vilstrup Johansen wrote:
> Hi
> 
> I get this error message. How do I solve this?
> 
> >library(affy)
> > Data <- ReadAffy ()
> reading CDF file
> processing information
> reading 2 CEL files..
> preparing probe level object
> Error: cannot allocate vector of size 3874 Kb
> In addition: Warning message: 
> Reached total allocation of 127Mb: see help(memory.size) 

  Hi,
    help(Memory) has some information. It could be a limit set (either
    by you or by the available resources).

         - if it doesn't then I suggest the R mail archive
	 (searchable). It can be found off of www.r-project.org 
        
Robert

> 
> I don't know if this is helpfull:
> > gc()
>          used (Mb) gc trigger (Mb)
> Ncells 301800  8.1    1068187 28.6
> Vcells  66248  0.6    8156627 62.3
> 
> > memory.size()
> [1] 102909640
> 
> > memory.limit()
> [1] 133619712
> 
> Thanks!
> regards,
>  Jens Johansen
> 

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| Robert Gentleman                 phone : (617) 632-5250                   |
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