[BioC] Bioconductor & tcltk

[Len F. Zaifman]

This is a multi-part message in MIME format.
--------------706AAF69B7644CD5AF81F506
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit

We installed R1.5.1 under an application user id, and loaded
Bioconductor into it (while logged in as the application id)  as per the
instructions.

This is on an SGI multiuser system.

The application id can load the library marrayPlots without any
problems.
When any onelse tries library(marrayPlots) we get:


Loading required package: tcltk
Error in dyn.load(x, as.logical(local), as.logical(now)) :
        unable to load shared library
"/tools/Rstat1.5.1/lib/R/library/tcltk/libs/tcltk.so":
  1203256:/tools/Rstat1.5.1/lib/R/bin/R.bin: rld: Fatal Error:
.....

The file itself has the correct permissions to be world readable:


ls -l /tools/Rstat1.5.1/lib/R/library/tcltk/li
bs/tcltk.so
-rwxr-xr-x    1 applicat academic   48196 Sep 26 09:08
/tools/Rstat1.5.1/lib/R/library/tcltk/libs/tcltk.so

and so do the directories along the path.

As it loads properly for the application id, I am assuming that rld is
setup for the application user in the R script, but not for other users.
But I cannot see in $RHOME/lib/R/bin/R where that is.

Is there an obvious answer to this question?
-- 
Len Zaifman
Manager, Supercomputing Systems
Centre for Computational Biology
Hospital for Sick Children
Toronto,Ont.
(416)813-5513
leonardz@bioinfo.sickkids.on.ca
--------------706AAF69B7644CD5AF81F506
Content-Type: text/x-vcard; charset=us-ascii;
 name="leonardz.vcf"
Content-Transfer-Encoding: 7bit
Content-Description: Card for Len F. Zaifman
Content-Disposition: attachment;
 filename="leonardz.vcf"

begin:vcard 
n:Zaifman;Len
tel;work:(416)813-5513
x-mozilla-html:FALSE
org:Hospital for Sick Children;Centre for Computational Biology
adr:;;555 University Ave.		;Toronto;Ont;M5G 1X8;Canada
version:2.1
email;internet:leonardz@bioinfo.sickkids.on.ca
title:Manager, Supercomputing Systems
x-mozilla-cpt:;8960
fn:Len Zaifman
end:vcard

--------------706AAF69B7644CD5AF81F506--