[BioC] bioconductor

Wolfgang Huber w.huber@dkfz-heidelberg.de
Sat, 28 Sep 2002 18:43:21 +0200


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Hi Jamie,

> I have been trying to install this software on my Win200 platform. I have
downloaded the
> Install Script and installed the R package...

When you start R, you get a command line interface. Click "File", "Source R
code" and select the file with the install script. Then
read the comments in the install script, and type

getBioC()

or

getBioC(...)

with the appropriate options. You will not have much fun with Bioconductor
unless you understand a little bit about R, so have a look at the
Introduction to R documents on www.r-project.org.

> BTW, do you have a Linux version of the software?
R and the Bioconductor packages run on Windows, Linux, other Unices, and
Mac.

Best regards
Wolfgang

Dr. Wolfgang Huber
http://www.dkfz.de/abt0840/whuber
Tel +49-6221-424709
Fax +49-6221-42524709
DKFZ
Division of Molecular Genome Analysis
69120 Heidelberg
Germany


-----Original Message-----
From: bioconductor-admin@stat.math.ethz.ch
[mailto:bioconductor-admin@stat.math.ethz.ch]On Behalf Of jamie zhou
Sent: Saturday, September 28, 2002 1:56 AM
To: bioconductor@stat.math.ethz.ch
Subject: [BioC] bioconductor


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<DIV><FONT face=3DArial size=3D2><SPAN class=3D915375715-28092002>Hi=20
Jamie,</SPAN></FONT></DIV>
<DIV><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2><FONT face=3DArial><SPAN =
class=3D915375715-28092002>&gt; </SPAN>I=20
have been trying to install this software on my Win200 platform. I have=20
downloaded the </FONT></FONT></DIV>
<DIV><FONT size=3D2><FONT face=3DArial><SPAN =
class=3D915375715-28092002>&gt;=20
</SPAN>Install Script and installed the R package<SPAN=20
class=3D915375715-28092002>...</SPAN></FONT></FONT></DIV>
<DIV><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2><SPAN class=3D915375715-28092002><FONT =
face=3DArial>When you start=20
R, you get a command line interface. Click "File",&nbsp;"Source R code" =
and=20
select the file with the install script. Then </FONT></DIV>
<DIV><FONT face=3DArial><FONT size=3D+0><FONT size=3D2><SPAN=20
class=3D915375715-28092002>read the comments in the install script,=20
and&nbsp;ty</SPAN></FONT></FONT>pe </FONT></SPAN></FONT></DIV>
<DIV><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002>getBioC()</SPAN></FONT></DIV>
<DIV><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT>&nbsp;</DIV>
<DIV><FONT face=3DArial size=3D2><SPAN class=3D915375715-28092002>or=20
</SPAN></FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002>getBioC(...)</SPAN></FONT></FONT></DIV>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT></FONT>&nbsp;</DIV>
<DIV><FONT size=3D+0><FONT size=3D2><SPAN =
class=3D915375715-28092002><FONT=20
face=3DArial>with the appropriate options. You will not have much fun =
with=20
Bioconductor unless you understand a little bit about R, so have a look =
at the=20
Introduction to R documents on </FONT><A =
href=3D"http://www.r-project.org"><FONT=20
face=3DArial color=3D#000000>www.r-project.org</FONT></A><FONT=20
face=3DArial>.</FONT></SPAN></FONT></FONT></DIV>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT></FONT></FONT><FONT =
face=3DArial=20
size=3D2></FONT>&nbsp;</DIV></DIV>
<DIV><FONT size=3D2><FONT face=3DArial><SPAN =
class=3D915375715-28092002>&gt;</SPAN>=20
BTW, do you have a Linux version of the software?</FONT></FONT>
<DIV><FONT face=3DArial size=3D2><SPAN class=3D915375715-28092002>R and =
the=20
Bioconductor packages run on Windows, Linux, other Unices, and=20
Mac.</SPAN></FONT></DIV>
<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN =
class=3D915375715-28092002>Best=20
regards</SPAN></FONT></FONT></DIV>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002>Wolfgang</SPAN></FONT></FONT></DIV>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN =
class=3D915375715-28092002><FONT=20
size=3D2></FONT></SPAN></FONT></FONT>&nbsp;</DIV>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN =
class=3D915375715-28092002><FONT=20
size=3D2>Dr. Wolfgang Huber<BR><A =
href=3D"http://www.dkfz.de/abt0840/whuber"=20
target=3D_blank>http://www.dkfz.de/abt0840/whuber</A><BR>Tel=20
+49-6221-424709<BR>Fax +49-6221-42524709<BR>DKFZ<BR>Division of =
Molecular Genome=20
Analysis<BR>69120 Heidelberg<BR>Germany</FONT> =
</DIV></SPAN></FONT></FONT>
<DIV><FONT size=3D+0><FONT face=3DArial size=3D2><SPAN=20
class=3D915375715-28092002></SPAN></FONT></FONT>&nbsp;</DIV></FONT></DIV>=

<DIV><FONT face=3DArial size=3D2></FONT>&nbsp;</DIV></DIV>
<DIV class=3DOutlookMessageHeader dir=3Dltr align=3Dleft><FONT =
face=3DArial=20
size=3D2>-----Original Message-----<BR><B>From:</B>=20
bioconductor-admin@stat.math.ethz.ch=20
[mailto:bioconductor-admin@stat.math.ethz.ch]<B>On Behalf Of </B>jamie=20
zhou<BR><B>Sent:</B> Saturday, September 28, 2002 1:56 AM<BR><B>To:</B>=20
bioconductor@stat.math.ethz.ch<BR><B>Subject:</B> [BioC]=20
bioconductor<BR></FONT></DIV></BODY></HTML>

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