[BioC] XML->envir?

John Zhang John Zhang <jzhang@jimmy.harvard.edu>
Fri, 21 Feb 2003 08:20:10 -0500 (EST)


>Hi,
>could somebody direct me to a routine that converts the XML data
>packages to R data packages? Specifically I am looking for the
>chromosome location of the genes corresponding to the probe sets in
>U133B. I can write an XSLT myself but don't want to reinvent the wheel,
>and the conversion tool I have here (XML Spy) bitches about it being
>non-valid.

You do not to do that as a package for u133b is available now. Just for your 
information, a function called xml2DataPkg in AnnBuilder does what you want. 





Jianhua Zhang
Department of Biostatistics
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084