I tried expresso to reproduce expression measures from MAS 5.0 but I get a slight
difference from Affymetrix as illustrated on a set of 3 chips for selected probe
sets. Any idea why that is? The version of Unix we have is SunOS Release 5.8.
Thanks,
Helene
100001_at 29.6222834908728 10.2880336221679 80.7973366171763
100002_at 9.94107964466495 62.9653009129815 53.7356175596969
100003_at 2262.85860839992 1539.08193903367 1910.0212276237
100004_at 305.100816246875 188.181043441888 239.902666074234
100005_at 434.482366404616 638.860562906946 589.86003783735
100006_at 61.9587790672468 32.9005081415387 61.5914892307955
100007_at 890.772109484179 988.46987085589 1076.17589775836
100009_r_at 89.4108950323307 46.1650654835421 54.0252748779586
100010_at 227.251880233698 401.164278682326 424.746403324436
100011_at 1157.66237359318 702.613181714498 882.033123210299
100012_at 893.256638440421 1511.96440725101 2054.18415149103
------------------------------------------------------------------------------------
100001_at 16 16 26.0 A 0.781017
100002_at 16 16 10.2 A 0.910595
100003_at 16 16 2271.8 P 0.000219
100004_at 16 16 302.2 P 0.004863
100005_at 16 16 439.1 P 0.006532
100006_at 16 16 63.5 A 0.358690
100007_at 16 16 894.7 P 0.001354
100009_r_at 16 16 90.2 P 0.000805
100010_at 16 16 227.4 P 0.009985
-------------------------------------------------------------------------------------
100001_at 16 16 11.0 A 0.602006
100002_at 16 16 58.8 A 0.438361
100003_at 16 16 1545.5 P 0.000219
100004_at 16 16 191.7 P 0.011447
100005_at 16 16 641.4 P 0.002617
100006_at 16 16 33.7 A 0.117160
100007_at 16 16 992.9 P 0.001141
100009_r_at 16 16 47.4 P 0.011447
100010_at 16 16 402.6 P 0.001354
-------------------------------------------------------------------------------------
100001_at 16 16 81.1 A 0.438361
100002_at 16 16 44.4 A 0.581931
100003_at 16 16 1917.2 P 0.000219
100004_at 16 16 244.2 P 0.031336
100005_at 16 16 591.0 P 0.001354
100006_at 16 16 62.9 A 0.089405
100007_at 16 16 1080.6 P 0.000673
100009_r_at 16 16 54.5 P 0.011447
100010_at 16 16 428.1 P 0.000959
------------------------------------------------------------------------------------