[BioC] Help with genbank

Jean Yee Hwa Yang jean at biostat.ucsf.edu
Thu Mar 6 11:20:18 MET 2003


Hi all,

I would like to extract the sequence information corresponding to an
accession number.  I use the function in annotate 
x <- genbank("AK008608")
to extract the XML file and hope someone can point me to some functions
(or directions) to further extract the sequence info from
x$doc$childern.

Thanks you.

Jean

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 Jean Yee Hwa Yang			 jean at biostat.ucsf.edu
 Division of Biostatistics,		   Tel: (415) 476-3368
 University of California,		   Fax: (415) 476-6014
 500 Parnassus Avenue, MU 420-W,  San Francisco, CA 94143-0560
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~



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