[BioC] SNP chips

Leslie M. Cope cope at mts.jhu.edu
Fri Sep 12 10:44:06 MEST 2003

I worked with Affy SNP chips 4 years ago.  I don't know if they are just 
the same now, but they were quite similar to the expression chips with 
data stored in .cel and .cdf files in a very similar format.  I imagine 
that many of the functions in the Affy package could be very quickly 
adapted to SNP chips, if they don't work already.  Has anyone tried to 
make a SNP cdf environment and then use read.affybatch?

Leslie Cope

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