[BioC] Paired samples in Limma

[Sean Davis]

Sorry.  I found at least partial answers in the list archives.  If 
anyone wants to offer insight, feel free, but I think I have enough.

Sean

On Aug 17, 2004, at 11:43 AM, Sean Davis wrote:

> We have a dataset including paired samples (treatment/no treatment) 
> within subject for many subjects.  Is there a specific method in Limma 
> for dealing with this situation or is subject just treated as another 
> factor?
>
> Thanks,
> Sean
>
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