[BioC] Error setting boxplot title in Affy

Paul Boutros Paul.Boutros at utoronto.ca
Mon Dec 27 08:20:05 CET 2004


Hi again,

I've been some troubles setting the title for boxplots of AffyBatch objects.
The output is below.  I was hoping to suggest a patch but... I actually
couldn't find the source anywhere in my win32 distribution -- only a
compiled DLL and RDA files.  I'm using R 2.0.0 and Affy 1.5.8 on windows.

Paul

> boxplot(eset, main="test");
Error in title(main = "", main = "test") :
        formal argument "main" matched by multiple actual arguments

> traceback();
9: title(main = "", main = "test")
8: do.call("title", pars[names(pars) %in% c("main", "cex.main",
       "col.main", "sub", "cex.sub", "col.sub", "xlab", "ylab",
       "cex.lab", "col.lab")])
7: bxp(z, width, varwidth = varwidth, notch = notch, log = log,
       border = border, col = col, pars = pars, outline = outline,
       horizontal = horizontal, add = add, at = at)
6: boxplot.default(data.frame(log2(intensity(x)[tmp, ])), main = main,
       range = range, ...)
5: boxplot(data.frame(log2(intensity(x)[tmp, ])), main = main, range =
range,
       ...)
4: boxplot(data.frame(log2(intensity(x)[tmp, ])), main = main, range =
range,
       ...)
3: .local(x, ...)
2: boxplot(eset, main = "test")
1: boxplot(eset, main = "test")



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