[BioC] warning message from using gcrma

[Rafael A. Irizarry]

tell us the version of gcrma. 
On Tue, 10 Feb 2004, Caimiao Wei wrote:

>  I tried to run gcrma on 15 chips on Windows XP with R1.9.0-development and
> Bioconductor development, and get the 50 warnings, the following is the
> output: 
>  
> eset<-gcrma(data)
> Loading required package: rgu34aprobe 
> Loading required package: matchprobes 
> background correction: gcrma 
> normalization: quantiles 
> PM/MM correction : pmonly 
> expression values: medianpolish 
> background correcting...done.
> normalizing...done.
> 8799 ids to be processed
> .........
> There were 50 or more warnings (use warnings() to see the first 50)
> > warnings()
> Warning messages:
> 1: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 2: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 3: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 4: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 5: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 6: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 7: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 8: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 9: multi-argument returns are deprecated in: return(y = yhat, wt) 
> 10: multi-argument returns are deprecated in: return(y = yhat, wt) 
> ...
> 
>  
> 
> I got the same warnings when used R1.8.1 with 1.3 Bioconductor.
> 
>  
> 
>  
> 
> I would appreciate any information.
> 
>  
> 
> Caimiao
> 
> 
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> 
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