[BioC] gcrma.bg.transformation missing in gcrma 1.1.0

Jeffrey Rasmussen rasmuss at u.washington.edu
Mon Jul 19 19:30:44 CEST 2004


Hi,

Using R 2.0.0-pre, gcrma 1.1.0, win2k:

> library(gcrma)
> atom.gcrma<-gcrma(atom.batch, type="fullmodel", fast=FALSE)
Computing affinities.Done.
Adjusting for optical effect.............Done.
Adjusting for non-specific binding.Error in bg.adjust.fullmodel(pms[, i],
mms[, i], pm.affinities, mm.affinities,  :
        couldn't find function "gcrma.bg.transformation"

This is similar to the problem reported at:
https://stat.ethz.ch/pipermail/bioconductor/2004-April/004394.html

Thanks,
Jeff.

__________________________________
Jeffrey Rasmussen
Research Consultant, Bioinformatics
Department of Immunology
University of Washington



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