[BioC] Image analysis for single channel macro arrays

[Nicholas Lewin-Koh]

Hi,
Actually I tried that. My tiffs don't seem to
be in the right format????

Spot> SetTemplate("batch", 3)
coercing to unsigned short integers ... imcoerceushort(): illegal input
image, pixel type IM_UINT1 disallowed (component 0)
imcoerceushort(): illegal input image, pixel type IM_UINT1 disallowed
(component 0)
Error in "[[.image"(Both, 1) : component index out of range

This problem seems to be in the load image function, in the corerce
short routine.
I am not that desperate yet that i am going to go in and fix it. 
Besides with the amount they charge for Spot I don't want to do their
work
for them :)

Nicholas

On Fri, 30 Jul 2004 16:29:18 +1000 (EST), "James Wettenhall"
<wettenhall at wehi.edu.au> said:
> Hi,
> 
> On Fri, 30 Jul 2004, Nicholas Lewin-Koh wrote:
> > Spot ...
> <snip>
> > Unfortunately, the way it is implemented is not very flexible and
> > only seems to work for 2 channel arrays.
> 
> Of course, you could just type in the same TIFF filename
> twice into your images.dataset file (for the red and the green
> channels), as long as you don't mind having two copies of your
> (single-channel) raw data within each .spot file.
> 
> Regards,
> James
>