[BioC] How to put out the normalization result of limma as a
wettenhall at wehi.edu.au
Mon Jun 14 18:14:34 CEST 2004
On Mon, 14 Jun 2004, xpzhang wrote:
> I am looking for methods to put out the normalization result. I used
> limma to do the normalization.
OK, then you should have an MA object.
You can use:
to see your current directory,
to change your current directory. (Forward-slashes are better
than back-slashes if you are a Windows user.)
Then to write tab-delimited text files, try this:
The first method writes the M values including an initial
column containing row names of the R matrix MA$M:
The second method omits the row names:
You can do the same thing for MA$A.
Hope this helps,
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