[BioC] (no subject)

[Steve Moore]

Hi all,

It has been a while since I have used the affy package.  I have done 
everything in the help manual and installed the HGU133 plus2 cdf 
environment.  When I start the program I put in the correct directory and 
load the affy library successfully. When I try to import the cel files using 
the following command

data<-ReadAffy()

I get the error message:

Error in read.affybatch(filenames = filenames, phenoData = phenoData,  :
        The file C:/Documents and Settings/smoore/Desktop/nat evbr cel 
files/BR1.CEL does not look like a CEL file

These files were taken from GCOS, does anyone know what may be happening 
here, am I maybe doing something wrong that I haven't noticed?  any help 
would be greatly appreciated.

Many Thanks

Steve.



Dr. Stephen Moore
Dept. of Oncology
Queens University of Belfast
U-Floor
Belfast City Hospital
Belfast
N.Ireland
BT9 7AB