[BioC] affy package

Jin, Ying ying.jin at Vanderbilt.Edu
Sat Mar 27 00:10:11 CET 2004


Greetings-,
 
We have successfully installed the Bioconductor software in Redhat Linux 7.2. However, the method of readAffy() failed in the recent use of the "affy" package although the method was successfully used before.
The screen out is like following:
 
[root at renaltools bioc]# R
R : Copyright 2003, The R Development Core Team
Version 1.7.1  (2003-06-16)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type `license()' or `licence()' for distribution details.
R is a collaborative project with many contributors.
Type `contributors()' for more information.
Type `demo()' for some demos, `help()' for on-line help, or
`help.start()' for a HTML browser interface to help.
Type `q()' to quit R.
> library(affy)
Welcome to Bioconductor 
         Vignettes contain introductory material.  To view, 
         simply type: openVignette() 
         For details on reading vignettes, see
         the openVignette help page.
Creating a new generic function for "summary" in package 
reposTools 
Synching your local package management information ...
> data <- readAffy()
Error: couldn't find function "readAffy"

Therefore, we can't use this package to analysis affy data. Please give a hand on this issue.Your help is highly appreciated.
 
Ying

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