[BioC] Names of the samples (CEL file)

Rafael A. Irizarry ririzarr at jhsph.edu
Thu May 6 17:46:26 CEST 2004


look at ?ReadAffy
you will see a sampleName argument. you can specify whatever you want 
when you read. 
On Thu, 6 May 2004, Adaikalavan Ramasamy wrote:

> unwanted <- "C:/Program Files/R/rw1090/rdata/"
> colnames(data.test) <- gsub(unwanted, "", colnames(data.test))
> 
> On Thu, 2004-05-06 at 15:58, Vitalina Komashko wrote:
> > Hello!
> > I read my CEL files using:
> > >data.test<-ReadAffy(widget=TRUE)
> > So I would like to look at the first sample name of my data:
> > >sampleNames(data.test[1])
> > [1] "C:/Program Files/R/rw1090/rdata/JS1999081101AA.CEL"
> > Why are the sample names displayed as a path to the corresponding file? How could I change it?
> > Thank you very much!
> > Vitalina.
> > 
> > 
> > 	[[alternative HTML version deleted]]
> > 
> > _______________________________________________
> > Bioconductor mailing list
> > Bioconductor at stat.math.ethz.ch
> > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor
> >
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor
>



More information about the Bioconductor mailing list