[BioC] LPE errors

Jain, Nitin Nitin.Jain at pfizer.com
Mon Nov 29 19:40:01 CET 2004

Hi Stephanie,

Could you please let me know the error you are getting with MAS 5?
The preprocessing function in LPE package is just IQR normalization 
and log (2) transformation, so you should be able to use any normalization
method with LPE.


Nitin Jain, PhD
Non Clinical Statistics
Pfizer, Inc. (Groton, CT)
Bldg: 260, # 1451
Ph:  (860) 686-2526 (Office)
Fax: (860) 686-6170

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch]On Behalf Of Stephanie
Sent: Monday, November 29, 2004 11:35 AM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] LPE errors

I posted recently regarding some error messages with LPE and just 
wanted to update in case anyone else was having problems with LPE.  I 
have since been able to run LPE on my rma data files, but not mas5.

Stephanie K. Mewborn, Ph.D.

University of Chicago
Department of Medicine, Section of Cardiology

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