[BioC] Citation of R, Bioconductor and Affy

Jordi Altirriba Gutiérrez altirriba at hotmail.com
Tue Oct 5 17:00:03 CEST 2004


Dear users,
I'm preparing a manuscript which includes the use of R, Bioconductor and the 
Affy package.
The citations that I have found are:
1.- R
R: Development core team (2004). R: A language and enviroment for 
statistical computing. R foundation for statistical computing. Vienna, 
Austria. http://www.r-project.org
2.- Bioconductor
Ihaka R and Gentleman R. R: A Language for Data Analysis and Graphics}. 
Journal of Computational and Graphical Statistics. 1996 (5)3:299-314.
3.- Affy package
Rafael. A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, 
Bridget Hobbs and Terence P. Speed (2003), Summaries of Affymetrix GeneChip 
probe level data Nucleic Acids Research 31(4):e15

Or I should citate any other reference? Such as:
Bioconductor: open software development for computational biology and 
bioinformatics
Robert C Gentleman , Vincent J Carey , Douglas M Bates , Ben Bolstad , 
Marcel Dettling , Sandrine Dudoit , Byron Ellis, Laurent Gautier, Yongchao 
Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano 
Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony 
J Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean 
YH Yang and Jianhua Zhang
Genome Biology 2004, 5:R80

Thank you for your time.


Jordi Altirriba
PhD student
Hospital Clinic - Barcelona - Spain



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