[BioC] R-2.0 matchprobe install error

Saurin D. Jani jani at musc.edu
Wed Oct 6 17:48:57 CEST 2004


Hi,

I am using R-2.0 and I am installing matchprobes , some how its giving me this
error. How should I solve this?


$ R CMD INSTALL -l /usr/local/lib/R/library matchprobes_1.0.8.tar.gz

* Installing *source* package 'matchprobes' ...
** libs
gcc -I/usr/local/lib/R/include  -I/usr/local/include -D__NO_MATH_INLINES
-mieee-fp  -fPIC  -g -O2 -c main.c -o main.o
gcc -I/usr/local/lib/R/include  -I/usr/local/include -D__NO_MATH_INLINES
-mieee-fp  -fPIC  -g -O2 -c strutils.c -o strutils.o
gcc -shared -L/usr/local/lib -o matchprobes.so main.o strutils.o
** R
** data
** inst
** save image
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
         Vignettes contain introductory material.  To view,
         simply type: openVignette()
         For details on reading vignettes, see
         the openVignette help page.
[1] TRUE
Loading required package: hgu95av2cdf
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Loading required package: matchprobes
Loading required package: hgu95av2probe
Error: no dimnames attribute for array
Execution halted
/usr/local/lib/R/bin/INSTALL: line 1:  4314 Broken pipe             cat
"/usr/local/lib/R/library/matchprobes/R/matchprobes"
ERROR: execution of package source for 'matchprobes' failed
** Removing '/usr/local/lib/R/library/matchprobes'
** Restoring previous '/usr/local/lib/R/library/matchprobes'



thanks
Saurin



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