[BioC] Does RMA performance affects number of cel files?

[Wolfgang Huber]

Hi Saurin,

RMA works well with as little as two arrays.

It is an interesting question how RMA compares to MAS if you have very
many replicate arrays - has anyone ever looked at that?

Best wishes
 Wolfgang


<quote who="Saurin D. Jani">
> Hi,
>
> Does RMA affects mumber of cell files ? means, more cel files RMA can get
> better
> results because I have only 6 cel files. (3 Knockout vs 3 wild type)
> Or MAS 5 is better?
>
>
> thanks,
> Saurin
>
>
>
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-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Http:  www.dkfz.de/abt0840/whuber