[BioC] new affy package

Sucheta Tripathy sutripa at vbi.vt.edu
Fri Oct 29 00:07:04 CEST 2004


Thanks, still the same error persists.

Don't I have any way to run the affy packages without setting up the 
display env. variables.

All out servers have firewall which does not let us connect to X servers 
from outside the local network.

Thanks

Sucheta

At 05:47 PM 10/28/2004 -0400, you wrote:
>Most of the bioconductor packages in the release 1.4 are built under R1.9.
>If you use R2.0, try to get the development packages.  You can use:
>getBioC("all", develOK=TRUE)
>
>Good luck.
>
>-----Original Message-----
>From: Sucheta Tripathy [mailto:sutripa at vbi.vt.edu]
>Sent: Thursday, October 28, 2004 3:49 PM
>To: bioconductor at stat.math.ethz.ch
>Subject: [BioC] new affy package
>
>Hi
>
>We have currently installed the new R-2.0 and also all the packages using
>the command
>
>  >source('/usr/local/bin/getBioC')         # Here the latest version of my
>GetBioC is stored
>  >getBioC("all")
>
>--
>
>When I try to test it, and try command
>
>  >library(affy)
>
>It gives me the following error messages, though I know I can set the
>display env. variable, but this was not appearing in the earlier
>R 1.98 version.
>-----------------------------------------------------
>Error in fun(...) : no display name and no $DISPLAY environment variable
>Error: .onLoad failed in loadNamespace for 'tcltk'
>Error: package 'tcltk' could not be loaded
>--------------------------------------------------------
>Can anyone comment on this.
>
>Thanks
>
>Sucheta
>
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