[BioC] package Ruuid

[Robert Gentleman]

As it says, you do not seem to have glib installed (or at least R is
unable to find the headers), so you need to install that - and how you
do that depends on your flavor of Linux...
 Best wishes,
   Robert

On Mon, Sep 06, 2004 at 02:35:55PM +0200, alberto goldoni wrote:
> Hi, i have R 1.9.0 under linux.
> i have downladed Ruuid package and then when i'm trying to install Ruuid:
> R CMD INSTALL /......../Ruuid_1.4.5.tar.gz
> * Installing *source* package 'Ruuid' ...
> creating cache ./config.cache
> checking for glib-config... no
> checking how to run the C preprocessor... cc -E
> checking for /usr/include/unistd.h... yes
> updating cache ./config.cache
> creating ./config.status
> creating src/Makevars
> ** libs
> gcc -I/usr/lib/R/include -I/usr/local/include/glib12 -DHAVE_UNISTD_H=1  
> -D__NO_MATH_INLINES -mieee-fp  -fPIC  -g -O2 -c Rinit.c -o Rinit.o
> In file included from Ruuid.h:5,
>                  from Rinit.c:1:
> uuidP.h:24:18: glib.h: No such file or directory
> In file included from Ruuid.h:5,
>                  from Rinit.c:1:
> uuidP.h:36: error: parse error before "guint32"
> uuidP.h:36: warning: no semicolon at end of struct or union
> uuidP.h:37: warning: data definition has no type or storage class
> uuidP.h:38: error: parse error before "time_hi_and_version"
> uuidP.h:38: warning: data definition has no type or storage class
> uuidP.h:39: error: parse error before "clock_seq"
> uuidP.h:39: warning: data definition has no type or storage class
> uuidP.h:40: error: parse error before "node"
> uuidP.h:40: warning: data definition has no type or storage class
> uuidP.h:41: error: parse error before '}' token
> make: *** [Rinit.o] Error 1
> ERROR: compilation failed for package 'Ruuid'
> ** Removing '/usr/local/lib/R/site-library/Ruuid'
> 
> 
> what can i do?
> 
> -- 
> Dott. Alberto Goldoni
> Lab. Genetica Medica
> S.Orsola-Malpighi Hospital
> Via Massarenti n.9
> 40138 - BOLOGNA (BO) - ITALY
> Mobile Phone: +39 3384145970
> Fax: +39 051 636 4004
> http://www.eurogene.org/
> http://www.lagem.it
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
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-- 
+---------------------------------------------------------------------------+
| Robert Gentleman                 phone : (617) 632-5250                   |
| Associate Professor              fax:   (617)  632-2444                   |
| Department of Biostatistics      office: M1B20                            |
| Harvard School of Public Health  email: rgentlem at jimmy.harvard.edu        |
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