[BioC] how to do MAS background correction for Mismatch?

[James W. MacDonald]

F Duan wrote:
> Dear All,
> 
> I am using "bg.correct.mas" to correct background for both PM and MM. The 
> default is for PM, for example, "bg.correct.mas(mydata)". Could anyone tell me 
> how to do it for Mismatch? 

If you look at the code for bg.correct.mas, you will note that it does 
background correction for both PM and MM probes.

Best,

Jim



> 
> Thanks a lot.
> 
> Frank
> 
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-- 
James W. MacDonald
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109