[BioC] GFF3 format from ucsc

Cook, Malcolm MEC at Stowers-Institute.org
Tue Aug 16 00:52:08 CEST 2005


hmmm

http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1088304 refers
to psl2gff which can be found at
http://lgsun.grc.nia.nih.gov/geneindex4/download.html


-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Sean Davis
Sent: Monday, August 08, 2005 5:45 AM
To: Bioconductor
Subject: [BioC] GFF3 format from ucsc


Just wondering if anyone knew of code to take a ucsc Genome Browser
tab-delimited file obtained via download and converting it to GFF3
format?

Thanks,
Sean

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