[BioC] From KEGG pathways to Affy ProbeID

Andrej Kastrin andrej.kastrin at siol.net
Mon Dec 5 17:26:26 CET 2005

Sharon Anbu wrote:

>Hi All,
>I am trying to get Affy ProbeID for all the pathways (particularly for
>"rat") in KEGG.  I have found a way to do this using
>contents(KEGGPATHID2NAME) environment and by using grep to match a
>particular pathway. I have to do this step manually for all the pathways. Is
>there any other ways to extract affy probeids for corresponding pathways?
>Thank you very much in advance.
>	[[alternative HTML version deleted]]
>Bioconductor mailing list
>Bioconductor at stat.math.ethz.ch
Try with apply()

Cheers, Andrej

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