[BioC] how to get samoutput$mat.fdr,

[Saurin Jani]

Hi Sean,

Thank you so much for useful hint. 

Have a great weekend and happy holidays,
Saurin 

--- Sean Davis <sdavis2 at mail.nih.gov> wrote:

> 
> 
> 
> On 12/22/05 7:53 AM, "Saurin Jani"
> <saurin_jani at yahoo.com> wrote:
> 
> > Dear BioC,
> > 
> > I am using siggenes package. If anyone have used,
> > please let me know, how can I get access of all
> > samoutput$fdr and samoutput$delta values from
> > samoutput object?
> > 
> > This might be very easy..but and even I have also
> > opened Vignette but there is not information in
> > Vignette as well.(sam.out$mat.fdr  gives NULL)
> 
> Saurin,
> 
> I haven't used SAM in a while, but have you tried:
> 
> str(sam.out)
> 
> That will give you the structure of the sam.out
> object and may give you a
> hint about where to look.
> 
> Sean
> 
> 
>