[BioC] Problems installing KEGGSOAP

[michael watson (IAH-C)]

Fantastic!

Now all I need is to make it work.  I'm getting lots of:

Error in curlPerform(url = url, httpheader = header, postfields = txt,
: 
        Connect failed; Timed out

Which I'm thinking is because I haven't got SSOAP or Rcurl set up
properly to work from behind my firewall and through my proxy.  R can
connect to the internet no problem, but not using getURL()

Any help would be appreciated :-)

Mick

-----Original Message-----
From: John Zhang [mailto:jzhang at jimmy.harvard.edu] 
Sent: 10 January 2005 14:47
To: michael watson (IAH-C)
Cc: bioconductor at stat.math.ethz.ch
Subject: Re: [BioC] Problems installing KEGGSOAP


Probably the XML you installed was not built under R 2.0.1. Use the one 
maintianed by Bioconductor may solve the problem:


>library("reposTools")
>install.packages2("XML")


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>Hi
>
>I'm running windows XP and R 2.0.1.  I successfully installed KEGGSOAP 
>from bioconductor, but when I tried to load it using library() it says 
>I don't have the XML library.  So I tried installing XML_0.97-0 from 
>http://cran.r-project.org/src/contrib/Descriptions/XML.html only to 
>find that I get the old R version error:
>
>> library(XML)
>Error in library(XML) : 'XML' is not a valid package -- installed < 
>2.0.0?
>
>Is there a combination of KEGGSOAP and XML that works with R 2.0.1?
>
>Thanks in advance
>
>Mick
>
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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084