[BioC] how-to-normalize-single-channel-data-in-cDNA-experiment

Adaikalavan Ramasamy ramasamy at cancer.org.uk
Mon Jul 18 18:08:09 CEST 2005

Why do you want to do this ?

There are good reasons for using both channels in two-colour data 
(to account for different amounts of probe spotted, cross hybridisation
and other biases at chip level).

Regards, Adai

On Mon, 2005-07-18 at 08:29 -0700, vijayaraj nagarajan wrote:
> hi
> i am interested in comparing the channel-1 data of two
> different cDNA experiments that we have carried out,
> without considering the channel-2 data.
> could anyone tell me about how to normalize this
> single channel data alone.
> thanks
> sincerely
> vijayaraj nagarajan
> graduate student
> the university of southern mississippi
> ms, us of a
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