[BioC] AffyPLM for Windows
lucia203 at hotmail.com
Fri Jul 22 16:26:31 CEST 2005
I read this message in list,
"The root cause of this problem was that ygs98 arrays have some probesets
consisting of only a single probe and that was not being properly dealt
with in the case of the default model. I have fixed this problem in
affyPLM version 1.4.1.
On Fri, 2005-06-17 at 15:09 +0200, Pedro Botías wrote:
>this is the output when insert Data in R:
>size of arrays=534x534 features (17828 kb)
>cdf=YG_S98 (9335 affyids)
>number of samples=8
>number of genes=9335
>The same error appear when I run affylmGUI with PLM normalization.
>On Fri, 2005-06-17 at 14:21 +0200, Pedro Botías wrote:
> > Hi
> > When I run Pset<-fitPLM(Data)
> > this is the error that appear:
> > Error in fitPLM(data) : LAPACK routine DPOTRF gave error code -4
> > How I can solucionated this error?
> > thanks
and I think that in new version has corrected the error.
Because I will use affyPLM with YGS98 arrays.
>Perhaps you could elaborate on what you think the error is with yeast in
>affyPLM 1.3.3 and won't be in affyPLM 1.4.2? If it is not fixed then I
>might be able to fix it.
>On Fri, 22 Jul 2005, lucia García wrote:
> > Hi,
> > I`m interesting in update AffyPLM to version 1.4.2, but it's only to
> > version, but to windows package is 1.3.3. When it will be available the
> > version 1.4.2 for windows? I need this version to fix an error in data
> > Yeast.
> > This erro will be fixed in affylmGUI?
> > Thanks
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