[BioC] Geo GDS parser availability

John Zhang jzhang at jimmy.harvard.edu
Wed Jul 27 20:25:13 CEST 2005

>Does anyone know of a GEO (gene expression omnibus) GDS parser (R, 
>perl, or otherwise)?

AnnBuilder has something that reads a file from GEO into R.
>geo <- GEO()
>temp <- queryGEO(geo, "GPL49")

Not sure if this is what you want.

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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084

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