[BioC] limma error message

Naomi Altman naomi at stat.psu.edu
Thu Jul 28 21:35:52 CEST 2005

I got this message when I used the wrong layout file.


At 03:03 PM 7/28/2005, Jianping Jin wrote:
>Dear BioConductor list,
>I got an error, Error: subscipt out of bounds, when I started to run a
>limma program normalizeWithinArrays(). What I wanted to do was to normalize
>eight cDNA slides. >dim(RG): 34970      8.
>I used >debug(normalizeWithinArrays) and then >normalizeWithinArrays(RG) to
>debug by either Browse[1]> n or c as well. But when I retried the program
>it gave me the same error message above.
>I will highly appreciate it if any one could give it shot.
>Best regards!
>x Jianping Jin Ph.D.            x
>x Bioinformatics scientist      x
>x Center for bioinformatics     x
>x 3133 Bioinformatics Building  x
>x CB# 7104                      x
>x University of North Carolina  x
>x Chapel Hill, NC 27599         x
>x Tel: (919)843-6105            x
>x Fax: (919)843-3103            x
>x E-mail: jjin at email.unc.edu    x
>Bioconductor mailing list
>Bioconductor at stat.math.ethz.ch

Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Bioinformatics Consulting Center
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
University Park, PA 16802-2111

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