[BioC] Resourcerer, Error in author[["authors"]]

John Zhang jzhang at jimmy.harvard.edu
Tue Jun 7 20:12:39 CEST 2005

The bug was actually in Resourcerer and has been fixed. Version 1.2.2 has the 
bug fix and should be up soon. Thanks.

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>Subject: [BioC] Resourcerer, Error in author[["authors"]]
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>Hello everybody,
>I have some trouble with Resourcerer package. I want to convert the
>Agilent_Human1Av2 array to a BioC meta-data package as described in "How to use
>Resourcerer". Everything goes fine (except the kegg errors) until this error:
>resourcerer2BioC("Agilent_Human1Av2.zip", organism="human",
>destDir=file.path(.path.package("Resourcerer"), "temp"),
>pkgName=("AgilentHuman1Av2"), srcUrls=getSrcUrl("all","Homo sapiens"),
>otherSrc=NULL,baseMapType="gbNRef", version="1.0.0", makeXML=TRUE, 
>baseUrl="ftp://ftp.tigr.org/pub/data/tgi/Resourcerer", check=FALSE,
>author=list(author="Anonymous",maintainer="mortema at medisin.uio"))
>Error in author[["authors"]] : subscript out of bounds
>[1] "Unsuccessful"
>I use R 2.1.0 and Resourcerer 1.1.1 on Linux
>Cant seem to figure this one out (its seems kinda trivial). Anyone knows what I 
am doing wrong? 
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>Bioconductor at stat.math.ethz.ch

Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084

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