[BioC] other.columns with ImaGene data (Limma read.maimages)
michael watson (IAH-C)
michael.watson at bbsrc.ac.uk
Tue Jun 21 18:05:55 CEST 2005
Where did you try looking?
They should be in somewhere like
From: bioconductor-bounces at stat.math.ethz.ch on behalf of Richard Pearson
Sent: Tue 21/06/2005 4:51 PM
To: Richard Pearson
Cc: bioconductor at stat.math.ethz.ch
Subject: [BioC] other.columns with ImaGene data (Limma read.maimages)
I can't seem to get the other.columns to work in read.maimages. I have
limma version 2.0.0. I have tried the following command:
RG <- read.maimages(files, source="imagene"
This loads the intensity data fine but I have no "other" columns. I assume
the problem is that this will call the read.imagene function which doesn't
have an other.columns option - is this correct? Can anyone suggest a simple
work around (my R is fairly limited at present!)?
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