[BioC] MA plot to pdf in limma

Sean Davis sdavis2 at mail.nih.gov
Wed Mar 30 16:52:48 CEST 2005


I have had similar problems.  If I use plotMA(.....,pch='.'), this 
seems to fix the issue for me.

Sean

On Mar 30, 2005, at 9:37 AM, Anja Schiel wrote:

> Hi limma users,
>
> I have a questions about the MA-plots.
> I try to save a number of graphs to one pdf-file which works for
> image-plots and PrintTip graphs but every time I try to save my MA 
> plots
> I get a pdf with only text and boxes but all colour-spots have gone (in
> the legend as well as in the picture itself).
>
> Any suggestions how to get all the information into pdf-format?
>
> Thanxs, Anja
>
>
> -- 
> Anja E. Schiel, Ph.D.
> Departments of General Internal Medicine and Human Genetics
> Leiden University Medical Center
> PO Box 9503
> 2300 RA Leiden
> The Netherlands
> tel: -31-(0)71-5276067
> fax: -31-(0)71-5276075
>
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