[BioC] GO with mu11ksuba(b)

[Seth Falcon]

Mayte Suarez-Farinas <mayte at babel.rockefeller.edu> writes:

> Hi,
> I was trying to use the GO package with the mouse chips mu11ksuba and 
> mu11ksubb. The following two functions:
>
>      res<-getGO(probesids[1:100],'mu11ksuba')
>      res<-unique(lookUp('GO:0006338','mu11ksuba',"GO2ALLPROBES"))
>
> gave the same error:
>
>      Error in package_version(vers) : invalid version spec
>
> But it works just fine with hgu95av2,
>
>      res<-unique(lookUp('GO:0006338','hgu95av2',"GO2ALLPROBES"))
>
> I reinstalled all BioC developmental package and the cdf and probe 
> packages for mu11ksuba(b) chips again and I still got the same error.
>
>
> Any hint ??

I think we don't have an annotation data package for the mu11ksuba
chip and that is what the error message is (trying) to tell you.

+ seth