[BioC] write.fit error

Gordon Smyth smyth at wehi.edu.au
Mon Sep 26 03:29:05 CEST 2005

The problem would appear to be in your data object, about which you give us 
no information.

1. There has been work on write.fit() recently. Try updating to the latest 
version from CRAN and see if the problem goes away.

2. In the latest versions of limma, you can also try write.table(fullfit, ...)

3. The problem is most likely that there is no component 'genes' in your 
'fullfit' object.

4. If none of the above helps, include 'show(fullfit)' and state the 
version of limma that you are using.


>[BioC] write.fit error
>scholz at Ag.arizona.edu scholz at Ag.arizona.edu
>Fri Sep 23 11:02:27 CEST 2005
>Hi all,
>R2.1.1 for windows xp
>I'm getting an error when I try to output my fitted data (called fullfit):
> >write.fit(fullfit, results=NULL, FStat=NULL, file="filename", digits=2,
>Error in data.frame(tab, fit$genes, check.names = FALSE) :
>         arguments imply differing number of rows: 32448, 0
>Any notions?
>scholz at ag.arizona.edu
>College of Agriculture and Life Sciences Web Mail.

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