[BioC] Affychip coli asv2 annotation files

lemerle at embl.de lemerle at embl.de
Sat Apr 1 00:21:12 CEST 2006


Dear list,

I am analysing Affymetrix GeneChips of type coli asv2.
I wanted to use the "annotate" package but found no appropriate annotation files
in the bioc repository.
I then found out about AnnBuilder, but the vignette mentions that for any
species that are neither human, rat or mouse, AnnBuilder needs to be
"extended".
The paragraph about AnnBuilder extension is a heading with no content in that
vignette (the ABPrimer). What is the status of this ?
Does someone maybe have such annotation files already that i may use?
(If so, could they maybe be added to the bioc repository?)
Thank you for an answer,

Caroline



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