[BioC] Problem installing hexbin?

Sander Oom slist at oomvanlieshout.net
Sun Apr 23 17:23:04 CEST 2006


Dear R-bioconductor users,

I have a problem installing hexbin from bioconductor:

> biocLite(c("hexbin"))

Running bioCLite version 0.1  with R version  2.2.1

Running biocinstall version 1.1  with R version  2.2.1
trying URL
'http://www.bioconductor.org/packages/bioc/1.7/src/contrib/hexbin_1.4.0.tar.gz'
Content type 'application/x-gzip' length 491520 bytes
opened URL
==================================================
downloaded 480Kb

* Installing *source* package 'hexbin' ...
** libs
gfortran   -fPIC   -c hbin.f -o hbin.o
 In file hbin.f:1

       subroutine hbin(x,y,cell,cnt,xcm,ycm, size, shape,
                                                       1
Error: Symbol 'shape' at (1) has no IMPLICIT type
make: *** [hbin.o] Error 1
ERROR: compilation failed for package 'hexbin'
** Removing '/usr/lib/R/library/hexbin'

The downloaded packages are in
        /tmp/RtmpZ12736/downloaded_packages
Warning message:
installation of package 'hexbin' had non-zero exit status in:
install.packages(pkgs = "hexbin", repos =
c("http://www.bioconductor.org/packages/bioc/1.7",
>

Any suggestions?

Thanks in advance for your help,

Sander.

PS....

I am using R on SUSE10:
> > version
         _
platform i686-pc-linux-gnu
arch     i686
os       linux-gnu
system   i686, linux-gnu
status
major    2
minor    2.1
year     2005
month    12
day      20
svn rev  36812
language R
> >



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