[BioC] One bad printtip in printtip loess using maNorm2D

Ye, Bin binye at med.wayne.edu
Tue Aug 1 04:46:15 CEST 2006


Hi, 
 
We have a batch of arrays that have some problems with one of the printtip, which resulted in a lot of missing values just for that printtip (eg. 285 missing values out of all 300 spots). Of course it generates error when normalizing with maNormMain(., f.loc=list(maNorm2D())). Now we still want to do printtip loess normalization, is there a way to ignore just that printtip?
 
Thanks a lot!
 
 
Bin



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