[BioC] athPkgBuilder

Nianhua Li nli at fhcrc.org
Sat Aug 19 04:45:22 CEST 2006


Sorry, here is an example script:

library(AnnBuilder)
fileExt <- getFileExt("ATH1")
ath1121501 <- function(pkgPath, version) {
    athPkgBuilder(
                  pkgName="ath1121501",
                  pkgPath=pkgPath,
                  version=version,
                  author=list(
                    authors="Ting-Yuan Liu, ChenWei Lin, Seth Falcon,
Jianhua Zhang, James W. MacDonald",
                    maintainer="Biocore Data Team
<biocannotation at lists.fhcrc.org>"
                    ),
                  fileExt = fileExt
    )
}
ath1121501(getwd(), "1.12.2")

To index the annotation with AGI locus ID, add indexby="ACCNUM".

thanks

nianhua



More information about the Bioconductor mailing list