[BioC] rflowcyt - read.series.FCS function

Seth Falcon sfalcon at fhcrc.org
Wed Aug 23 17:50:24 CEST 2006


Jabez Wilson <jabezwuk at yahoo.co.uk> writes:

> Thanks for the response. I don't seem to be able to get your examples
> to run. Everything is OK up to:
>    
>   plotdensity.FCS(foo,varpos=c(1),main="Gated FSC
> values",ylim=c(0,0.01),ylab="Density of cells")
>    
>   I get an error message in both examples:
>    
>   Error in sort(x) : 'x' must be atomic In addition: Warning messages:
> 1: no finite arguments to min; returning Inf 2: no finite arguments to
> max; returning -Inf Error in plot(density.lf(x[[1]][, varpos]), type =
> "n", xlab = xlab, ylab = ylab, : unable to find the argument 'x' in
> selecting a method for function 'plot'
>
>   I'm using R version 2.2.1, 2005-12-20, i386-pc-mingw32, rflowcyt
> version 1.2.0
>    
>   Any thoughts?  

Perhaps upgrading to R 2.3.1 and the latest rflowcyt release?

+ seth



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