[BioC] GEOquery - was queryGEO fails on GDS files (GEO Datasets)

Sean Davis sdavis2 at mail.nih.gov
Wed Jan 11 21:55:35 CET 2006

On 1/11/06 3:21 PM, "Peter" <bioconductor-mailinglist at maubp.freeserve.co.uk>

> But this does not:
>> geneNames(eset)
> getGEO seems to parse the ID (and the IDENTIFIER) columns fine, so I'm
> guessing that this is a problem in GDS2eSet.
> I would expect to get "AFFX-BioB-5_at", "AFFX-BioC-3_at", ... back as
> the geneNames values.

This is now fixed in the repository and should be fixed in the packaged
files in 24 hours or so.  Thanks.


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