[BioC] limma - How to write the output of normalizeWithinArray() function output

[Sean Davis]

On 1/24/06 11:44 AM, "Srinivas Iyyer" <srini_iyyer_bio at yahoo.com> wrote:

> Dear group,
> I am confused about writing back the MA values from
> normalizeWithinArrays() function output.
> 
> Example:
> 
> myMA <-
> normalizeWithinArrays(my_int_object,method='printtiploess',bc.method='none')
> 
> 
> now I want to write the MA values from 30 chips in
> myMA to a file or files.

Sri,

I assume that by "write the MA values" you mean write the ratios, or
M-values?

 write.table(myMA$M,'myMvals.txt',sep="\t")

If that isn't what you meant, perhaps you could clarify.

Sean