[BioC] Error: cannot allocate vector of size ...
M L Smith
mls40 at cam.ac.uk
Fri Jul 21 18:24:16 CEST 2006
Hi Paul,
If you've followed that advice or you've already got plenty of RAM
you can try the command:
memory.limit(2048)
This should allow R to use 2Gb of RAM (the max it can use on a
normal Windows machine), rather than the 1Gb it defaults too.
Mike Smith
> Wall, Dennis Paul wrote:
> > I am trying to run the pam algorithm for k-means clustering, but keep
> > getting the error "Error: cannot allocate vector of size 1048384K"
> >
> > Any help on how to fix this would be greatly appreciated.
>
> That error means you are running out of RAM. The quickest, best
fix is
> to get more.
>
> Best,
>
> Jim
>
>
> >
> >
> > Cheers,
> >
> > Dennis
> >
> > _______________________________________________
--
Computational Biology Group
Hutchison / MRC Research Centre
Department of Oncology
University of Cambridge
Hills Rd, Cambridge CB2 2XZ
Email: mls40 at cam.ac.uk
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